If you've ever tied your shoes without looking at the laces you know what muscle memory is all about.
Muscle memory is about proprioception, which is your body's innate ability to understand where all the parts of your body are (relative to each other and their surroundings) and the amount of force needed, distance covered, and direction of movement of each body part necessary to conduct a task.
When a task is conducted often enough, you don't have to think about these things. There are actual receptors (
proprioceptor - definition of proprioceptor by Medical dictionary) in your muscles, tendons, and joints that are responsible for this ability - such as being able to bring your forefinger to the tip of you nose with your eyes closed - so this ability is actually located "in the muscles" to a large extent. If not for the muscle memory of these proprioceptors you'd poke yourself in the eye or shove your finger in your mouth as often as you'd find the tip of your nose. While, of course, your forefinger has no cognitive abilities, in a certain sense the tip of your forefinger actually does "remember" where the tip of your nose is located. Without muscle memory you'd need to re-learn how to walk every time you got out a chair. In fact you'd have to relearn how to get out of the chair if your muscles didn't "remember" how to do so.
In diving we take advantage of lots of existing muscle memory, and can even create new ones. Your right thumb knows where your right collarbone is and your left thumb knows where your left hip is, which makes clipping a light off or checking your SPG very easy. And while your hand may not currently know where your right post or alternate reg are located, with enough repetition your hand will eventually "learn" and ultimately "remember" these locations. This is why gear standardization is important, and why many people dive the same configuration in all environments. My right thumb remembers where my backup light is... whether I'm diving steel doubles and trimix at 190ft touring the lower engine room of a wreck in NJ or in diving aluminum 80 looking at pretty fishies at 35ft on a Cayman reef.
There's also a difference between "muscle memory" and "force of habit."
It's the difference between being able to tie your shoe laces without looking (muscle memory) and depressing a clutch pedal that isn't there (force of habit.)
Yes, conducting the relatively complex sequence of motions necessary to depress the clutch pedal (where is it, how high do you lift your foot, how far do you depress the clutch, with how much force, etc) is driven by "muscle memory." However, the unconscious thought to actually invoke the motion, even absent the presence of a clutch, is force of habit. In other words "force of habit" explains WHY Lynn clipped off her req without even realizing she had done so.... but "muscle memory" explains HOW she was able to accomplish this.